Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Scnn1aQ61180 Mtag2-201ENSMUST00000058665 714 ntBASIC21.23■□□□□ 0.99
Scnn1aQ61180 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scnn1aQ61180 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Scnn1aQ61180 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scnn1aQ61180 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.23■□□□□ 0.99
Scnn1aQ61180 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scnn1aQ61180 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scnn1aQ61180 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scnn1aQ61180 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.23■□□□□ 0.99
Scnn1aQ61180 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Scnn1aQ61180 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scnn1aQ61180 BC021767-201ENSMUST00000126387 1716 ntBASIC21.21■□□□□ 0.99
Scnn1aQ61180 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scnn1aQ61180 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scnn1aQ61180 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.21■□□□□ 0.99
Scnn1aQ61180 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scnn1aQ61180 Gm10138-203ENSMUST00000206952 366 ntBASIC21.21■□□□□ 0.99
Scnn1aQ61180 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scnn1aQ61180 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scnn1aQ61180 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scnn1aQ61180 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scnn1aQ61180 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scnn1aQ61180 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scnn1aQ61180 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scnn1aQ61180 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scnn1aQ61180 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scnn1aQ61180 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scnn1aQ61180 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.2■□□□□ 0.98
Scnn1aQ61180 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.2■□□□□ 0.98
Scnn1aQ61180 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.2■□□□□ 0.98
Scnn1aQ61180 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.2■□□□□ 0.98
Scnn1aQ61180 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.2■□□□□ 0.98
Scnn1aQ61180 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scnn1aQ61180 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.18■□□□□ 0.98
Scnn1aQ61180 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Scnn1aQ61180 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scnn1aQ61180 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scnn1aQ61180 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Scnn1aQ61180 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.17■□□□□ 0.98
Scnn1aQ61180 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.17■□□□□ 0.98
Scnn1aQ61180 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.17■□□□□ 0.98
Scnn1aQ61180 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scnn1aQ61180 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scnn1aQ61180 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scnn1aQ61180 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scnn1aQ61180 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scnn1aQ61180 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Scnn1aQ61180 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.16■□□□□ 0.98
Scnn1aQ61180 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Scnn1aQ61180 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.16■□□□□ 0.98
Scnn1aQ61180 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scnn1aQ61180 Mir1199-201ENSMUST00000117015 119 ntBASIC21.16■□□□□ 0.98
Scnn1aQ61180 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scnn1aQ61180 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scnn1aQ61180 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scnn1aQ61180 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.15■□□□□ 0.98
Scnn1aQ61180 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.15■□□□□ 0.98
Scnn1aQ61180 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scnn1aQ61180 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scnn1aQ61180 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scnn1aQ61180 Gm15375-201ENSMUST00000119510 849 ntBASIC21.15■□□□□ 0.98
Scnn1aQ61180 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms