Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd4Q60688 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd4Q60688 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Foxd4Q60688 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd4Q60688 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Foxd4Q60688 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd4Q60688 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.82■□□□□ 0.6
Foxd4Q60688 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.82■□□□□ 0.6
Foxd4Q60688 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd4Q60688 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd4Q60688 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd4Q60688 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Foxd4Q60688 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.82■□□□□ 0.6
Foxd4Q60688 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd4Q60688 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxd4Q60688 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.81■□□□□ 0.6
Foxd4Q60688 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd4Q60688 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd4Q60688 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Foxd4Q60688 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd4Q60688 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Foxd4Q60688 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Foxd4Q60688 Gm43060-201ENSMUST00000200621 289 ntBASIC18.81■□□□□ 0.6
Foxd4Q60688 AC073947.1-201ENSMUST00000216991 649 ntBASIC18.81■□□□□ 0.6
Foxd4Q60688 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd4Q60688 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.81■□□□□ 0.6
Foxd4Q60688 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd4Q60688 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxd4Q60688 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Foxd4Q60688 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Foxd4Q60688 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Foxd4Q60688 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd4Q60688 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd4Q60688 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd4Q60688 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd4Q60688 Gm7860-201ENSMUST00000121190 879 ntBASIC18.8■□□□□ 0.6
Foxd4Q60688 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.8■□□□□ 0.6
Foxd4Q60688 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.8■□□□□ 0.6
Foxd4Q60688 Gm10493-201ENSMUST00000097270 612 ntBASIC18.8■□□□□ 0.6
Foxd4Q60688 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd4Q60688 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Foxd4Q60688 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Foxd4Q60688 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxd4Q60688 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Foxd4Q60688 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Foxd4Q60688 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Foxd4Q60688 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Foxd4Q60688 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.79■□□□□ 0.6
Foxd4Q60688 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.79■□□□□ 0.6
Foxd4Q60688 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Foxd4Q60688 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.79■□□□□ 0.6
Foxd4Q60688 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Foxd4Q60688 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxd4Q60688 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd4Q60688 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd4Q60688 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd4Q60688 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd4Q60688 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd4Q60688 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd4Q60688 Gm27801-201ENSMUST00000184174 223 ntBASIC18.78■□□□□ 0.6
Foxd4Q60688 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.78■□□□□ 0.6
Foxd4Q60688 Gm42569-201ENSMUST00000200539 472 ntBASIC18.78■□□□□ 0.6
Foxd4Q60688 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd4Q60688 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.78■□□□□ 0.6
Foxd4Q60688 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd4Q60688 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Foxd4Q60688 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxd4Q60688 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxd4Q60688 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Foxd4Q60688 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Foxd4Q60688 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Foxd4Q60688 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Foxd4Q60688 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd4Q60688 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd4Q60688 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd4Q60688 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd4Q60688 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Foxd4Q60688 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Foxd4Q60688 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms