Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim38Q5SZ99 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim38Q5SZ99 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim38Q5SZ99 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim38Q5SZ99 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim38Q5SZ99 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.08■□□□□ 0.64
Trim38Q5SZ99 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.08■□□□□ 0.64
Trim38Q5SZ99 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim38Q5SZ99 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.08■□□□□ 0.64
Trim38Q5SZ99 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.08■□□□□ 0.64
Trim38Q5SZ99 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim38Q5SZ99 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim38Q5SZ99 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.08■□□□□ 0.64
Trim38Q5SZ99 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim38Q5SZ99 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim38Q5SZ99 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim38Q5SZ99 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.08■□□□□ 0.64
Trim38Q5SZ99 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim38Q5SZ99 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Gm42642-201ENSMUST00000200683 355 ntBASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim38Q5SZ99 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.05■□□□□ 0.64
Trim38Q5SZ99 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim38Q5SZ99 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trim38Q5SZ99 Gm7514-201ENSMUST00000209475 934 ntBASIC19.05■□□□□ 0.64
Trim38Q5SZ99 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim38Q5SZ99 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.05■□□□□ 0.64
Trim38Q5SZ99 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim38Q5SZ99 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trim38Q5SZ99 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim38Q5SZ99 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trim38Q5SZ99 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Gm6420-201ENSMUST00000193885 723 ntBASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim38Q5SZ99 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim38Q5SZ99 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms