Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Gm37856-201ENSMUST00000191634 999 ntBASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Gm44549-201ENSMUST00000208351 577 ntBASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav2Q5R1I9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.66□□□□□ -0.06
Trav2Q5R1I9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Gm22240-201ENSMUST00000175225 82 ntBASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav2Q5R1I9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Trav2Q5R1I9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Gm12896-201ENSMUST00000118430 226 ntBASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav2Q5R1I9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Gm13168-201ENSMUST00000121771 632 ntBASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav2Q5R1I9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Trav2Q5R1I9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav2Q5R1I9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms