Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Gm5786-201ENSMUST00000085368 882 ntBASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Mir6538-201ENSMUST00000183713 110 ntBASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav7d-4Q5R1H9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav7d-4Q5R1H9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Gm11175-201ENSMUST00000116172 543 ntBASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav7d-4Q5R1H9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav7d-4Q5R1H9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav7d-4Q5R1H9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav7d-4Q5R1H9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms