Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Clhc1Q5M6W3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clhc1Q5M6W3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Gm12251-201ENSMUST00000117893 792 ntBASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Clhc1Q5M6W3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Gm8493-201ENSMUST00000196881 489 ntBASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clhc1Q5M6W3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
Clhc1Q5M6W3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Clhc1Q5M6W3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Clhc1Q5M6W3 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Clhc1Q5M6W3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms