Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Gm10493-201ENSMUST00000097270 612 ntBASIC18.21■□□□□ 0.51
Scn2bQ56A07 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn2bQ56A07 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.2■□□□□ 0.5
Scn2bQ56A07 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2bQ56A07 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn2bQ56A07 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.19■□□□□ 0.5
Scn2bQ56A07 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.19■□□□□ 0.5
Scn2bQ56A07 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Gm38205-201ENSMUST00000192243 258 ntBASIC18.19■□□□□ 0.5
Scn2bQ56A07 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.19■□□□□ 0.5
Scn2bQ56A07 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Gm9988-201ENSMUST00000069786 435 ntBASIC18.19■□□□□ 0.5
Scn2bQ56A07 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn2bQ56A07 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Scn2bQ56A07 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Gm8495-201ENSMUST00000188740 694 ntBASIC18.18■□□□□ 0.5
Scn2bQ56A07 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scn2bQ56A07 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Gm42778-201ENSMUST00000199644 553 ntBASIC18.17■□□□□ 0.5
Scn2bQ56A07 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.17■□□□□ 0.5
Scn2bQ56A07 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2bQ56A07 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2bQ56A07 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2bQ56A07 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2bQ56A07 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2bQ56A07 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scn2bQ56A07 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.16■□□□□ 0.5
Scn2bQ56A07 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.16■□□□□ 0.5
Scn2bQ56A07 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.16■□□□□ 0.5
Scn2bQ56A07 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.16■□□□□ 0.5
Scn2bQ56A07 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2bQ56A07 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2bQ56A07 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.16■□□□□ 0.5
Scn2bQ56A07 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.16■□□□□ 0.5
Scn2bQ56A07 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2bQ56A07 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2bQ56A07 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scn2bQ56A07 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms