Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Syne3Q4FZC9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Gm13534-201ENSMUST00000121169 513 ntBASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Gm7291-201ENSMUST00000199147 382 ntBASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Syne3Q4FZC9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne3Q4FZC9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne3Q4FZC9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne3Q4FZC9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne3Q4FZC9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne3Q4FZC9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Syne3Q4FZC9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Syne3Q4FZC9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Syne3Q4FZC9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Syne3Q4FZC9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Syne3Q4FZC9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Syne3Q4FZC9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Syne3Q4FZC9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Syne3Q4FZC9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne3Q4FZC9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne3Q4FZC9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Syne3Q4FZC9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syne3Q4FZC9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.44■□□□□ 0.7
Syne3Q4FZC9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Syne3Q4FZC9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.44■□□□□ 0.7
Syne3Q4FZC9 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.44■□□□□ 0.7
Syne3Q4FZC9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms