Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smcr8Q3UMB5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smcr8Q3UMB5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smcr8Q3UMB5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smcr8Q3UMB5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Gm2399-201ENSMUST00000104944 225 ntBASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Gm11249-201ENSMUST00000117071 859 ntBASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Gm5643-201ENSMUST00000117081 966 ntBASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smcr8Q3UMB5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smcr8Q3UMB5 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.67■□□□□ 0.74
Smcr8Q3UMB5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smcr8Q3UMB5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.67■□□□□ 0.74
Smcr8Q3UMB5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smcr8Q3UMB5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smcr8Q3UMB5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smcr8Q3UMB5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smcr8Q3UMB5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smcr8Q3UMB5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smcr8Q3UMB5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms