Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.24■□□□□ 0.51
Atxn1P54254 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atxn1P54254 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atxn1P54254 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atxn1P54254 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atxn1P54254 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atxn1P54254 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atxn1P54254 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Atxn1P54254 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.23■□□□□ 0.51
Atxn1P54254 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.23■□□□□ 0.51
Atxn1P54254 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atxn1P54254 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atxn1P54254 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Atxn1P54254 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atxn1P54254 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atxn1P54254 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atxn1P54254 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.22■□□□□ 0.51
Atxn1P54254 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Atxn1P54254 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Atxn1P54254 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Atxn1P54254 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Atxn1P54254 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.21■□□□□ 0.51
Atxn1P54254 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atxn1P54254 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atxn1P54254 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atxn1P54254 Gm13158-201ENSMUST00000122007 736 ntBASIC18.21■□□□□ 0.51
Atxn1P54254 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Atxn1P54254 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.21■□□□□ 0.51
Atxn1P54254 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atxn1P54254 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atxn1P54254 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Atxn1P54254 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atxn1P54254 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Atxn1P54254 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Atxn1P54254 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Atxn1P54254 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.2■□□□□ 0.5
Atxn1P54254 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Atxn1P54254 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.2■□□□□ 0.5
Atxn1P54254 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atxn1P54254 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Atxn1P54254 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.19■□□□□ 0.5
Atxn1P54254 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn1P54254 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Atxn1P54254 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Atxn1P54254 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.19■□□□□ 0.5
Atxn1P54254 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.19■□□□□ 0.5
Atxn1P54254 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn1P54254 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.19■□□□□ 0.5
Atxn1P54254 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn1P54254 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Atxn1P54254 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Atxn1P54254 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.18■□□□□ 0.5
Atxn1P54254 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.18■□□□□ 0.5
Atxn1P54254 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.18■□□□□ 0.5
Atxn1P54254 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Atxn1P54254 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Atxn1P54254 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.18■□□□□ 0.5
Atxn1P54254 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atxn1P54254 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Atxn1P54254 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Atxn1P54254 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Atxn1P54254 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.17■□□□□ 0.5
Atxn1P54254 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.17■□□□□ 0.5
Atxn1P54254 Gm10517-202ENSMUST00000192970 758 ntBASIC18.17■□□□□ 0.5
Atxn1P54254 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.17■□□□□ 0.5
Atxn1P54254 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Atxn1P54254 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn1P54254 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atxn1P54254 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.17■□□□□ 0.5
Atxn1P54254 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.16■□□□□ 0.5
Atxn1P54254 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atxn1P54254 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Atxn1P54254 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Atxn1P54254 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms