Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lbx1P52955 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lbx1P52955 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lbx1P52955 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.81■□□□□ 0.44
Lbx1P52955 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lbx1P52955 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lbx1P52955 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lbx1P52955 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lbx1P52955 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lbx1P52955 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.8■□□□□ 0.44
Lbx1P52955 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Lbx1P52955 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Lbx1P52955 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lbx1P52955 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Lbx1P52955 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.8■□□□□ 0.44
Lbx1P52955 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lbx1P52955 Gm18206-201ENSMUST00000207027 926 ntBASIC17.8■□□□□ 0.44
Lbx1P52955 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lbx1P52955 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lbx1P52955 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.8■□□□□ 0.44
Lbx1P52955 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lbx1P52955 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.8■□□□□ 0.44
Lbx1P52955 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Lbx1P52955 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lbx1P52955 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.8■□□□□ 0.44
Lbx1P52955 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lbx1P52955 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Lbx1P52955 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Lbx1P52955 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Lbx1P52955 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.79■□□□□ 0.44
Lbx1P52955 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lbx1P52955 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lbx1P52955 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.79■□□□□ 0.44
Lbx1P52955 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lbx1P52955 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.78■□□□□ 0.44
Lbx1P52955 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lbx1P52955 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lbx1P52955 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lbx1P52955 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.78■□□□□ 0.44
Lbx1P52955 Gm15375-201ENSMUST00000119510 849 ntBASIC17.78■□□□□ 0.44
Lbx1P52955 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lbx1P52955 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lbx1P52955 Gm18733-201ENSMUST00000173950 856 ntBASIC17.78■□□□□ 0.44
Lbx1P52955 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lbx1P52955 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lbx1P52955 Iqck-206ENSMUST00000208658 2891 ntBASIC17.78■□□□□ 0.44
Lbx1P52955 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lbx1P52955 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lbx1P52955 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lbx1P52955 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lbx1P52955 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Lbx1P52955 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lbx1P52955 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.76■□□□□ 0.43
Lbx1P52955 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.76■□□□□ 0.43
Lbx1P52955 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lbx1P52955 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Lbx1P52955 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.76■□□□□ 0.43
Lbx1P52955 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lbx1P52955 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Lbx1P52955 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.76■□□□□ 0.43
Lbx1P52955 Mir8098-201ENSMUST00000184011 137 ntBASIC17.76■□□□□ 0.43
Lbx1P52955 Gm17808-201ENSMUST00000200859 894 ntBASIC17.76■□□□□ 0.43
Lbx1P52955 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lbx1P52955 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lbx1P52955 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lbx1P52955 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Lbx1P52955 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.75■□□□□ 0.43
Lbx1P52955 Gm34391-201ENSMUST00000203706 907 ntBASIC17.75■□□□□ 0.43
Lbx1P52955 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lbx1P52955 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lbx1P52955 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lbx1P52955 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lbx1P52955 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms