Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.68■□□□□ 0.42
Rph3aP47708 Gm7291-201ENSMUST00000199147 382 ntBASIC17.68■□□□□ 0.42
Rph3aP47708 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.68■□□□□ 0.42
Rph3aP47708 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rph3aP47708 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rph3aP47708 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rph3aP47708 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.67■□□□□ 0.42
Rph3aP47708 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.67■□□□□ 0.42
Rph3aP47708 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rph3aP47708 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rph3aP47708 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rph3aP47708 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rph3aP47708 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rph3aP47708 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.66■□□□□ 0.42
Rph3aP47708 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rph3aP47708 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rph3aP47708 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rph3aP47708 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rph3aP47708 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rph3aP47708 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rph3aP47708 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.65■□□□□ 0.42
Rph3aP47708 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rph3aP47708 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rph3aP47708 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rph3aP47708 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.65■□□□□ 0.42
Rph3aP47708 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rph3aP47708 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rph3aP47708 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.65■□□□□ 0.42
Rph3aP47708 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rph3aP47708 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Rph3aP47708 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rph3aP47708 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rph3aP47708 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rph3aP47708 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rph3aP47708 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rph3aP47708 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rph3aP47708 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rph3aP47708 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rph3aP47708 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rph3aP47708 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rph3aP47708 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.64■□□□□ 0.41
Rph3aP47708 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Rph3aP47708 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.64■□□□□ 0.41
Rph3aP47708 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Rph3aP47708 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rph3aP47708 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rph3aP47708 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rph3aP47708 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.63■□□□□ 0.41
Rph3aP47708 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rph3aP47708 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rph3aP47708 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rph3aP47708 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Rph3aP47708 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rph3aP47708 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.62■□□□□ 0.41
Rph3aP47708 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rph3aP47708 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rph3aP47708 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms