Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 DUG2YBR281C 2637 nt1.6□□□□□ -2.15
VPS55P47111 HFM1YGL251C 3564 nt1.6□□□□□ -2.15
VPS55P47111 YDR098C-AYDR098C-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YDR210C-CYDR210C-C 1323 nt1.6□□□□□ -2.15
VPS55P47111 YDR261C-CYDR261C-C 1323 nt1.6□□□□□ -2.15
VPS55P47111 YDR316W-AYDR316W-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YDR365W-AYDR365W-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YER137C-AYER137C-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YER159C-AYER159C-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YGR027W-AYGR027W-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YGR038C-AYGR038C-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YGR161C-CYGR161C-C 1323 nt1.6□□□□□ -2.15
VPS55P47111 YJR026WYJR026W 1323 nt1.6□□□□□ -2.15
VPS55P47111 YJR028WYJR028W 1323 nt1.6□□□□□ -2.15
VPS55P47111 YAR010CYAR010C 1323 nt1.6□□□□□ -2.15
VPS55P47111 YLR157C-AYLR157C-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YLR227W-AYLR227W-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YLR256W-AYLR256W-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YML040WYML040W 1323 nt1.6□□□□□ -2.15
VPS55P47111 YML045W-AYML045W-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YMR051CYMR051C 1323 nt1.6□□□□□ -2.15
VPS55P47111 YNL054W-AYNL054W-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YOL103W-AYOL103W-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YPL257W-AYPL257W-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YPR137C-AYPR137C-A 1323 nt1.6□□□□□ -2.15
VPS55P47111 YPR158C-CYPR158C-C 1323 nt1.6□□□□□ -2.15
VPS55P47111 FIR1YER032W 2631 nt1.59□□□□□ -2.15
VPS55P47111 YDL050CYDL050C 372 nt1.59□□□□□ -2.15
VPS55P47111 TIF35YDR429C 825 nt1.59□□□□□ -2.15
VPS55P47111 YER172C-AYER172C-A 381 nt1.59□□□□□ -2.15
VPS55P47111 YGR111WYGR111W 1203 nt1.59□□□□□ -2.15
VPS55P47111 RTS3YGR161C 792 nt1.59□□□□□ -2.15
VPS55P47111 PET191YJR034W 327 nt1.59□□□□□ -2.15
VPS55P47111 VMA6YLR447C 1038 nt1.59□□□□□ -2.15
VPS55P47111 DGR1YNL130C-A 147 nt1.59□□□□□ -2.15
VPS55P47111 MF(ALPHA)1YPL187W 498 nt1.59□□□□□ -2.15
VPS55P47111 YFR016CYFR016C 3702 nt1.59□□□□□ -2.16
VPS55P47111 YNL011CYNL011C 1335 nt1.59□□□□□ -2.16
VPS55P47111 RDS2YPL133C 1341 nt1.59□□□□□ -2.16
VPS55P47111 GDI1YER136W 1356 nt1.59□□□□□ -2.16
VPS55P47111 EAP1YKL204W 1899 nt1.58□□□□□ -2.16
VPS55P47111 YIL092WYIL092W 1902 nt1.58□□□□□ -2.16
VPS55P47111 YFH1YDL120W 525 nt1.58□□□□□ -2.16
VPS55P47111 YDR222WYDR222W 1248 nt1.58□□□□□ -2.16
VPS55P47111 COG2YGR120C 789 nt1.58□□□□□ -2.16
VPS55P47111 RPC17YJL011C 486 nt1.58□□□□□ -2.16
VPS55P47111 YKL177WYKL177W 339 nt1.58□□□□□ -2.16
VPS55P47111 SIP18YMR175W 240 nt1.58□□□□□ -2.16
VPS55P47111 SEC66YBR171W 621 nt1.58□□□□□ -2.16
VPS55P47111 SWD3YBR175W 948 nt1.58□□□□□ -2.16
VPS55P47111 SRO9YCL037C 1305 nt1.58□□□□□ -2.16
VPS55P47111 EDS1YBR033W 2760 nt1.58□□□□□ -2.16
VPS55P47111 INO80YGL150C 4470 nt1.58□□□□□ -2.16
VPS55P47111 RGA1YOR127W 3024 nt1.57□□□□□ -2.16
VPS55P47111 SEC59YMR013C 1560 nt1.57□□□□□ -2.16
VPS55P47111 ERT1YBR239C 1590 nt1.57□□□□□ -2.16
VPS55P47111 RTN1YDR233C 888 nt1.57□□□□□ -2.16
VPS55P47111 YEL028WYEL028W 462 nt1.57□□□□□ -2.16
VPS55P47111 YGR026WYGR026W 837 nt1.57□□□□□ -2.16
VPS55P47111 DCG1YIR030C 735 nt1.57□□□□□ -2.16
VPS55P47111 DUG3YNL191W 1074 nt1.57□□□□□ -2.16
VPS55P47111 COS1YNL336W 1146 nt1.57□□□□□ -2.16
VPS55P47111 YOR062CYOR062C 807 nt1.57□□□□□ -2.16
VPS55P47111 ITT1YML068W 1395 nt1.57□□□□□ -2.16
VPS55P47111 YDR261W-BYDR261W-B 5313 nt1.56□□□□□ -2.16
VPS55P47111 YFL002W-AYFL002W-A 5313 nt1.56□□□□□ -2.16
VPS55P47111 YGR161W-BYGR161W-B 5313 nt1.56□□□□□ -2.16
VPS55P47111 YCL019WYCL019W 5313 nt1.56□□□□□ -2.16
VPS55P47111 AFI1YOR129C 2682 nt1.56□□□□□ -2.16
VPS55P47111 UBR1YGR184C 5853 nt1.56□□□□□ -2.16
VPS55P47111 PIN4YBL051C 2007 nt1.56□□□□□ -2.16
VPS55P47111 MCM21YDR318W 1107 nt1.56□□□□□ -2.16
VPS55P47111 DAD4YDR320C-A 219 nt1.56□□□□□ -2.16
VPS55P47111 YBL012CYBL012C 402 nt1.56□□□□□ -2.16
VPS55P47111 YOR314WYOR314W 330 nt1.56□□□□□ -2.16
VPS55P47111 HSH49YOR319W 642 nt1.56□□□□□ -2.16
VPS55P47111 HMT1YBR034C 1047 nt1.56□□□□□ -2.16
VPS55P47111 YOR093CYOR093C 4947 nt1.56□□□□□ -2.16
VPS55P47111 ATG11YPR049C 3537 nt1.56□□□□□ -2.16
VPS55P47111 YOL057WYOL057W 2136 nt1.55□□□□□ -2.16
VPS55P47111 NEL1YHR035W 1893 nt1.55□□□□□ -2.16
VPS55P47111 YCL076WYCL076W 744 nt1.55□□□□□ -2.16
VPS55P47111 PIB1YDR313C 861 nt1.55□□□□□ -2.16
VPS55P47111 TIM9YEL020W-A 264 nt1.55□□□□□ -2.16
VPS55P47111 CAJ1YER048C 1176 nt1.55□□□□□ -2.16
VPS55P47111 STE2YFL026W 1296 nt1.55□□□□□ -2.16
VPS55P47111 YHR097CYHR097C 1101 nt1.55□□□□□ -2.16
VPS55P47111 YIL024CYIL024C 570 nt1.55□□□□□ -2.16
VPS55P47111 ERV41YML067C 1059 nt1.55□□□□□ -2.16
VPS55P47111 POL30YBR088C 777 nt1.55□□□□□ -2.16
VPS55P47111 SKO1YNL167C 1944 nt1.55□□□□□ -2.16
VPS55P47111 SWA2YDR320C 2007 nt1.55□□□□□ -2.16
VPS55P47111 HSC82YMR186W 2118 nt1.55□□□□□ -2.16
VPS55P47111 MSA1YOR066W 1890 nt1.54□□□□□ -2.16
VPS55P47111 FAB1YFR019W 6837 nt1.54□□□□□ -2.16
VPS55P47111 MYO2YOR326W 4725 nt1.54□□□□□ -2.16
VPS55P47111 BRR6YGL247W 594 nt1.54□□□□□ -2.16
VPS55P47111 LSM8YJR022W 330 nt1.54□□□□□ -2.16
VPS55P47111 EMC2YJR088C 879 nt1.54□□□□□ -2.16
VPS55P47111 YOL134CYOL134C 390 nt1.54□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 19.8 ms