Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.22■□□□□ 0.03
Abca1P41233 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.22■□□□□ 0.03
Abca1P41233 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.22■□□□□ 0.03
Abca1P41233 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.22■□□□□ 0.03
Abca1P41233 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Abca1P41233 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Abca1P41233 Gm44549-201ENSMUST00000208351 577 ntBASIC15.21■□□□□ 0.03
Abca1P41233 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.21■□□□□ 0.03
Abca1P41233 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca1P41233 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.21■□□□□ 0.02
Abca1P41233 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.21■□□□□ 0.02
Abca1P41233 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.21■□□□□ 0.02
Abca1P41233 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abca1P41233 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Abca1P41233 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.2■□□□□ 0.02
Abca1P41233 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.2■□□□□ 0.02
Abca1P41233 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.2■□□□□ 0.02
Abca1P41233 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.2■□□□□ 0.02
Abca1P41233 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca1P41233 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.19■□□□□ 0.02
Abca1P41233 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca1P41233 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.19■□□□□ 0.02
Abca1P41233 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Abca1P41233 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca1P41233 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca1P41233 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca1P41233 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Abca1P41233 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca1P41233 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca1P41233 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca1P41233 Gm13158-201ENSMUST00000122007 736 ntBASIC15.19■□□□□ 0.02
Abca1P41233 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.19■□□□□ 0.02
Abca1P41233 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.19■□□□□ 0.02
Abca1P41233 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.19■□□□□ 0.02
Abca1P41233 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca1P41233 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Abca1P41233 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abca1P41233 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.18■□□□□ 0.02
Abca1P41233 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Abca1P41233 Mir5122-201ENSMUST00000175004 89 ntBASIC15.18■□□□□ 0.02
Abca1P41233 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.18■□□□□ 0.02
Abca1P41233 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Abca1P41233 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.18■□□□□ 0.02
Abca1P41233 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Abca1P41233 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abca1P41233 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Abca1P41233 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Abca1P41233 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Abca1P41233 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abca1P41233 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abca1P41233 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Abca1P41233 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Abca1P41233 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.17■□□□□ 0.02
Abca1P41233 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Gm11249-201ENSMUST00000117071 859 ntBASIC15.17■□□□□ 0.02
Abca1P41233 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.17■□□□□ 0.02
Abca1P41233 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.17■□□□□ 0.02
Abca1P41233 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.17■□□□□ 0.02
Abca1P41233 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Abca1P41233 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.17■□□□□ 0.02
Abca1P41233 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Abca1P41233 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.17■□□□□ 0.02
Abca1P41233 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms