Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd8P29595 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd8P29595 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd8P29595 Etf1-202ENSMUST00000180351 108 ntBASIC17.05■□□□□ 0.32
Nedd8P29595 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd8P29595 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.05■□□□□ 0.32
Nedd8P29595 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd8P29595 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nedd8P29595 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.04■□□□□ 0.32
Nedd8P29595 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nedd8P29595 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd8P29595 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Nedd8P29595 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.03■□□□□ 0.32
Nedd8P29595 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd8P29595 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nedd8P29595 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nedd8P29595 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.02■□□□□ 0.32
Nedd8P29595 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nedd8P29595 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nedd8P29595 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Nedd8P29595 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.02■□□□□ 0.32
Nedd8P29595 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.02■□□□□ 0.32
Nedd8P29595 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nedd8P29595 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Nedd8P29595 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nedd8P29595 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.02■□□□□ 0.31
Nedd8P29595 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nedd8P29595 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nedd8P29595 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nedd8P29595 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.01■□□□□ 0.31
Nedd8P29595 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.01■□□□□ 0.31
Nedd8P29595 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.01■□□□□ 0.31
Nedd8P29595 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.01■□□□□ 0.31
Nedd8P29595 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Nedd8P29595 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nedd8P29595 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17■□□□□ 0.31
Nedd8P29595 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17■□□□□ 0.31
Nedd8P29595 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Nedd8P29595 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nedd8P29595 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nedd8P29595 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nedd8P29595 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.99■□□□□ 0.31
Nedd8P29595 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.99■□□□□ 0.31
Nedd8P29595 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.99■□□□□ 0.31
Nedd8P29595 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nedd8P29595 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Nedd8P29595 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nedd8P29595 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nedd8P29595 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nedd8P29595 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms