Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nckap1P28660 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nckap1P28660 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nckap1P28660 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.3■□□□□ 0.52
Nckap1P28660 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nckap1P28660 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nckap1P28660 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nckap1P28660 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Nckap1P28660 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nckap1P28660 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nckap1P28660 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nckap1P28660 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nckap1P28660 Gm13158-201ENSMUST00000122007 736 ntBASIC18.29■□□□□ 0.52
Nckap1P28660 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nckap1P28660 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.29■□□□□ 0.52
Nckap1P28660 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nckap1P28660 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nckap1P28660 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nckap1P28660 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nckap1P28660 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Nckap1P28660 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nckap1P28660 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.29■□□□□ 0.52
Nckap1P28660 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Nckap1P28660 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nckap1P28660 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.28■□□□□ 0.52
Nckap1P28660 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.28■□□□□ 0.52
Nckap1P28660 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nckap1P28660 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nckap1P28660 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nckap1P28660 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nckap1P28660 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Nckap1P28660 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nckap1P28660 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nckap1P28660 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nckap1P28660 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nckap1P28660 Gm15378-201ENSMUST00000121894 207 ntBASIC18.27■□□□□ 0.52
Nckap1P28660 Mir6982-201ENSMUST00000184354 68 ntBASIC18.27■□□□□ 0.52
Nckap1P28660 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.27■□□□□ 0.52
Nckap1P28660 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Nckap1P28660 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Nckap1P28660 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Nckap1P28660 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Nckap1P28660 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nckap1P28660 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.26■□□□□ 0.51
Nckap1P28660 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.26■□□□□ 0.51
Nckap1P28660 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nckap1P28660 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.26■□□□□ 0.51
Nckap1P28660 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.25■□□□□ 0.51
Nckap1P28660 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Nckap1P28660 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nckap1P28660 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1P28660 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Nckap1P28660 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.24■□□□□ 0.51
Nckap1P28660 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.24■□□□□ 0.51
Nckap1P28660 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nckap1P28660 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1P28660 Mir7071-201ENSMUST00000184847 69 ntBASIC18.24■□□□□ 0.51
Nckap1P28660 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.24■□□□□ 0.51
Nckap1P28660 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1P28660 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1P28660 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.24■□□□□ 0.51
Nckap1P28660 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1P28660 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1P28660 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nckap1P28660 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.23■□□□□ 0.51
Nckap1P28660 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1P28660 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1P28660 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Nckap1P28660 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.23■□□□□ 0.51
Nckap1P28660 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Nckap1P28660 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.23■□□□□ 0.51
Nckap1P28660 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1P28660 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.23■□□□□ 0.51
Nckap1P28660 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1P28660 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1P28660 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1P28660 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nckap1P28660 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nckap1P28660 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms