Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgn1P18608 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgn1P18608 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmgn1P18608 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.85■□□□□ 0.29
Hmgn1P18608 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.85■□□□□ 0.29
Hmgn1P18608 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Hmgn1P18608 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hmgn1P18608 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hmgn1P18608 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Hmgn1P18608 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmgn1P18608 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.83■□□□□ 0.29
Hmgn1P18608 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hmgn1P18608 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Hmgn1P18608 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hmgn1P18608 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn1P18608 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn1P18608 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn1P18608 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn1P18608 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn1P18608 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgn1P18608 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn1P18608 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hmgn1P18608 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn1P18608 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn1P18608 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn1P18608 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn1P18608 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.82■□□□□ 0.28
Hmgn1P18608 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.82■□□□□ 0.28
Hmgn1P18608 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.82■□□□□ 0.28
Hmgn1P18608 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn1P18608 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn1P18608 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn1P18608 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.82■□□□□ 0.28
Hmgn1P18608 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgn1P18608 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Hmgn1P18608 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hmgn1P18608 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmgn1P18608 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.81■□□□□ 0.28
Hmgn1P18608 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Hmgn1P18608 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hmgn1P18608 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgn1P18608 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn1P18608 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn1P18608 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn1P18608 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn1P18608 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn1P18608 Gm9847-201ENSMUST00000052528 599 ntBASIC16.8■□□□□ 0.28
Hmgn1P18608 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn1P18608 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgn1P18608 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.8■□□□□ 0.28
Hmgn1P18608 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Hmgn1P18608 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Hmgn1P18608 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn1P18608 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn1P18608 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn1P18608 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn1P18608 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.79■□□□□ 0.28
Hmgn1P18608 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn1P18608 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.79■□□□□ 0.28
Hmgn1P18608 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.79■□□□□ 0.28
Hmgn1P18608 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn1P18608 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn1P18608 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hmgn1P18608 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn1P18608 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgn1P18608 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.78■□□□□ 0.28
Hmgn1P18608 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 Fst-202ENSMUST00000223640 2612 ntBASIC16.78■□□□□ 0.28
Hmgn1P18608 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Hmgn1P18608 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms