Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04214 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04214 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
P04214 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04214 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04214 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04214 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.39■□□□□ 0.69
P04214 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P04214 Gm23634-201ENSMUST00000175071 91 ntBASIC19.39■□□□□ 0.69
P04214 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.39■□□□□ 0.69
P04214 Gm18959-201ENSMUST00000208954 655 ntBASIC19.39■□□□□ 0.69
P04214 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04214 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.39■□□□□ 0.69
P04214 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04214 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
P04214 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P04214 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P04214 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
P04214 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P04214 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04214 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04214 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
P04214 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04214 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.37■□□□□ 0.69
P04214 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04214 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04214 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.37■□□□□ 0.69
P04214 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.37■□□□□ 0.69
P04214 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.37■□□□□ 0.69
P04214 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04214 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.36■□□□□ 0.69
P04214 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.36■□□□□ 0.69
P04214 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.36■□□□□ 0.69
P04214 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
P04214 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P04214 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
P04214 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
P04214 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04214 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.35■□□□□ 0.69
P04214 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04214 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
P04214 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04214 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04214 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04214 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.35■□□□□ 0.69
P04214 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P04214 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.35■□□□□ 0.69
P04214 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P04214 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
P04214 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04214 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.34■□□□□ 0.69
P04214 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04214 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.34■□□□□ 0.69
P04214 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04214 Gm18032-201ENSMUST00000222541 538 ntBASIC19.34■□□□□ 0.69
P04214 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04214 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04214 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04214 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
P04214 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P04214 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P04214 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P04214 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
P04214 Gm10013-201ENSMUST00000106074 672 ntBASIC19.33■□□□□ 0.68
P04214 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04214 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04214 Gm10517-202ENSMUST00000192970 758 ntBASIC19.33■□□□□ 0.68
P04214 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
P04214 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
P04214 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04214 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04214 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04214 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
P04214 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
P04214 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.32■□□□□ 0.68
P04214 Gm6345-202ENSMUST00000180900 204 ntBASIC19.32■□□□□ 0.68
P04214 Gm27741-201ENSMUST00000185060 237 ntBASIC19.32■□□□□ 0.68
P04214 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.32■□□□□ 0.68
P04214 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04214 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P04214 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04214 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
P04214 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
P04214 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P04214 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
P04214 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04214 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.31■□□□□ 0.68
P04214 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P04214 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms