Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
P01852 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.77■□□□□ 0.28
P01852 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01852 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P01852 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01852 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01852 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01852 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01852 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
P01852 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01852 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
P01852 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01852 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.77■□□□□ 0.28
P01852 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01852 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01852 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01852 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01852 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01852 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.76■□□□□ 0.27
P01852 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
P01852 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.76■□□□□ 0.27
P01852 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.76■□□□□ 0.27
P01852 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.76■□□□□ 0.27
P01852 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.76■□□□□ 0.27
P01852 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
P01852 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01852 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.75■□□□□ 0.27
P01852 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.75■□□□□ 0.27
P01852 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.75■□□□□ 0.27
P01852 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
P01852 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
P01852 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01852 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
P01852 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
P01852 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
P01852 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
P01852 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
P01852 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
P01852 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.74■□□□□ 0.27
P01852 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.74■□□□□ 0.27
P01852 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
P01852 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.74■□□□□ 0.27
P01852 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.74■□□□□ 0.27
P01852 Grk6-206ENSMUST00000224995 2971 ntBASIC16.74■□□□□ 0.27
P01852 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
P01852 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01852 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P01852 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
P01852 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
P01852 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P01852 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P01852 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P01852 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
P01852 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P01852 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P01852 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P01852 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.72■□□□□ 0.27
P01852 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01852 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01852 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01852 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01852 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms