Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P01808 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
P01808 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.67■□□□□ 0.26
P01808 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
P01808 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
P01808 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
P01808 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P01808 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
P01808 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
P01808 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
P01808 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01808 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.65■□□□□ 0.26
P01808 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.65■□□□□ 0.26
P01808 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01808 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
P01808 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01808 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.65■□□□□ 0.26
P01808 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01808 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
P01808 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
P01808 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P01808 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P01808 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01808 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
P01808 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P01808 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P01808 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01808 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
P01808 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
P01808 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01808 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
P01808 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
P01808 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
P01808 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01808 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
P01808 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
P01808 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
P01808 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.62■□□□□ 0.25
P01808 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 Gm10602-201ENSMUST00000098239 609 ntBASIC16.62■□□□□ 0.25
P01808 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
P01808 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01808 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.62■□□□□ 0.25
P01808 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.62■□□□□ 0.25
P01808 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01808 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01808 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P01808 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01808 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01808 Gm22325-201ENSMUST00000158904 308 ntBASIC16.61■□□□□ 0.25
P01808 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01808 Gm26524-201ENSMUST00000192339 390 ntBASIC16.61■□□□□ 0.25
P01808 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P01808 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P01808 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01808 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P01808 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01808 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.61■□□□□ 0.25
P01808 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.6■□□□□ 0.25
P01808 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01808 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms