Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gm10493-201ENSMUST00000097270 612 ntBASIC16.42■□□□□ 0.22
Hdac3O88895 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hdac3O88895 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.42■□□□□ 0.22
Hdac3O88895 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac3O88895 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac3O88895 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac3O88895 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.41■□□□□ 0.22
Hdac3O88895 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac3O88895 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.41■□□□□ 0.22
Hdac3O88895 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac3O88895 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac3O88895 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hdac3O88895 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac3O88895 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hdac3O88895 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac3O88895 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hdac3O88895 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac3O88895 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac3O88895 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.41■□□□□ 0.22
Hdac3O88895 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.41■□□□□ 0.22
Hdac3O88895 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac3O88895 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hdac3O88895 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac3O88895 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac3O88895 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac3O88895 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac3O88895 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hdac3O88895 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac3O88895 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.4■□□□□ 0.22
Hdac3O88895 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.4■□□□□ 0.22
Hdac3O88895 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.4■□□□□ 0.22
Hdac3O88895 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.4■□□□□ 0.22
Hdac3O88895 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac3O88895 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.4■□□□□ 0.22
Hdac3O88895 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.4■□□□□ 0.22
Hdac3O88895 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Hdac3O88895 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac3O88895 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Hdac3O88895 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.39■□□□□ 0.21
Hdac3O88895 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.39■□□□□ 0.21
Hdac3O88895 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.39■□□□□ 0.21
Hdac3O88895 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Hdac3O88895 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hdac3O88895 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Hdac3O88895 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac3O88895 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.38■□□□□ 0.21
Hdac3O88895 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.38■□□□□ 0.21
Hdac3O88895 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Hdac3O88895 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Hdac3O88895 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.38■□□□□ 0.21
Hdac3O88895 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Hdac3O88895 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Hdac3O88895 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Hdac3O88895 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.37■□□□□ 0.21
Hdac3O88895 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Hdac3O88895 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Hdac3O88895 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Hdac3O88895 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hdac3O88895 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hdac3O88895 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms