Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Rarb-207ENSMUST00000225921 2756 ntBASIC13.01□□□□□ -0.33
Sh2d1aO88890 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sh2d1aO88890 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Sh2d1aO88890 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13□□□□□ -0.33
Sh2d1aO88890 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13□□□□□ -0.33
Sh2d1aO88890 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sh2d1aO88890 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.99□□□□□ -0.33
Sh2d1aO88890 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
Sh2d1aO88890 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sh2d1aO88890 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.98□□□□□ -0.33
Sh2d1aO88890 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sh2d1aO88890 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.97□□□□□ -0.33
Sh2d1aO88890 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh2d1aO88890 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sh2d1aO88890 Reep4-203ENSMUST00000226563 1444 ntBASIC12.96□□□□□ -0.33
Sh2d1aO88890 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh2d1aO88890 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sh2d1aO88890 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sh2d1aO88890 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sh2d1aO88890 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh2d1aO88890 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sh2d1aO88890 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.96□□□□□ -0.33
Sh2d1aO88890 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sh2d1aO88890 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms