Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.78■□□□□ 0.6
ShdO88834 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShdO88834 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ShdO88834 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShdO88834 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ShdO88834 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ShdO88834 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ShdO88834 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShdO88834 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShdO88834 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShdO88834 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShdO88834 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShdO88834 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.77■□□□□ 0.6
ShdO88834 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShdO88834 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.77■□□□□ 0.6
ShdO88834 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShdO88834 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShdO88834 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ShdO88834 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ShdO88834 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
ShdO88834 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ShdO88834 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ShdO88834 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShdO88834 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShdO88834 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShdO88834 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShdO88834 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ShdO88834 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
ShdO88834 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ShdO88834 Gm29257-201ENSMUST00000186115 639 ntBASIC18.76■□□□□ 0.59
ShdO88834 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.76■□□□□ 0.59
ShdO88834 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShdO88834 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ShdO88834 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ShdO88834 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShdO88834 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
ShdO88834 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShdO88834 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShdO88834 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.75■□□□□ 0.59
ShdO88834 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.75■□□□□ 0.59
ShdO88834 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.75■□□□□ 0.59
ShdO88834 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.75■□□□□ 0.59
ShdO88834 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ShdO88834 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.75■□□□□ 0.59
ShdO88834 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ShdO88834 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShdO88834 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShdO88834 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.75■□□□□ 0.59
ShdO88834 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.75■□□□□ 0.59
ShdO88834 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ShdO88834 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShdO88834 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShdO88834 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShdO88834 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ShdO88834 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ShdO88834 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShdO88834 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShdO88834 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ShdO88834 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ShdO88834 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ShdO88834 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
ShdO88834 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.74■□□□□ 0.59
ShdO88834 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ShdO88834 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.73■□□□□ 0.59
ShdO88834 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.73■□□□□ 0.59
ShdO88834 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Gm6365-201ENSMUST00000054711 744 ntBASIC18.73■□□□□ 0.59
ShdO88834 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ShdO88834 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ShdO88834 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.72■□□□□ 0.59
ShdO88834 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.72■□□□□ 0.59
ShdO88834 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ShdO88834 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.72■□□□□ 0.59
ShdO88834 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ShdO88834 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ShdO88834 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShdO88834 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShdO88834 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.71■□□□□ 0.59
ShdO88834 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShdO88834 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ShdO88834 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms