Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Capns1O88456 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Capns1O88456 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Capns1O88456 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Capns1O88456 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
Capns1O88456 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.95■□□□□ 0.3
Capns1O88456 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
Capns1O88456 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Capns1O88456 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Capns1O88456 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Capns1O88456 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Capns1O88456 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capns1O88456 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capns1O88456 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capns1O88456 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Capns1O88456 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Capns1O88456 Gm42642-201ENSMUST00000200683 355 ntBASIC16.94■□□□□ 0.3
Capns1O88456 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.94■□□□□ 0.3
Capns1O88456 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Capns1O88456 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Capns1O88456 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Capns1O88456 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Capns1O88456 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Capns1O88456 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Capns1O88456 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Capns1O88456 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Capns1O88456 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.93■□□□□ 0.3
Capns1O88456 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.93■□□□□ 0.3
Capns1O88456 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Capns1O88456 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Capns1O88456 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.92■□□□□ 0.3
Capns1O88456 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Capns1O88456 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Capns1O88456 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.92■□□□□ 0.3
Capns1O88456 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Capns1O88456 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.91■□□□□ 0.3
Capns1O88456 Gm26833-201ENSMUST00000180899 440 ntBASIC16.91■□□□□ 0.3
Capns1O88456 Gm43060-201ENSMUST00000200621 289 ntBASIC16.91■□□□□ 0.3
Capns1O88456 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.91■□□□□ 0.3
Capns1O88456 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Capns1O88456 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.9■□□□□ 0.3
Capns1O88456 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.9■□□□□ 0.3
Capns1O88456 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.9■□□□□ 0.3
Capns1O88456 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.9■□□□□ 0.3
Capns1O88456 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.9■□□□□ 0.3
Capns1O88456 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms