Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc3O88196 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ttc3O88196 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc3O88196 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc3O88196 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Ttc3O88196 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc3O88196 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc3O88196 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ttc3O88196 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.37■□□□□ 0.69
Ttc3O88196 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ttc3O88196 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc3O88196 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ttc3O88196 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.37■□□□□ 0.69
Ttc3O88196 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc3O88196 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc3O88196 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc3O88196 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc3O88196 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Ttc3O88196 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.36■□□□□ 0.69
Ttc3O88196 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc3O88196 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.36■□□□□ 0.69
Ttc3O88196 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ttc3O88196 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc3O88196 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.36■□□□□ 0.69
Ttc3O88196 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.36■□□□□ 0.69
Ttc3O88196 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc3O88196 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.36■□□□□ 0.69
Ttc3O88196 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ttc3O88196 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ttc3O88196 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ttc3O88196 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.35■□□□□ 0.69
Ttc3O88196 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ttc3O88196 Gm15565-201ENSMUST00000118890 427 ntBASIC19.35■□□□□ 0.69
Ttc3O88196 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.35■□□□□ 0.69
Ttc3O88196 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.35■□□□□ 0.69
Ttc3O88196 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ttc3O88196 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ttc3O88196 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.35■□□□□ 0.69
Ttc3O88196 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ttc3O88196 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc3O88196 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc3O88196 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc3O88196 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc3O88196 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Ttc3O88196 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ttc3O88196 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc3O88196 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.34■□□□□ 0.69
Ttc3O88196 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ttc3O88196 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.33■□□□□ 0.69
Ttc3O88196 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ttc3O88196 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ttc3O88196 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ttc3O88196 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ttc3O88196 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.32■□□□□ 0.68
Ttc3O88196 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.32■□□□□ 0.68
Ttc3O88196 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Gm38285-201ENSMUST00000192928 922 ntBASIC19.32■□□□□ 0.68
Ttc3O88196 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.32■□□□□ 0.68
Ttc3O88196 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.32■□□□□ 0.68
Ttc3O88196 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ttc3O88196 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ttc3O88196 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.32■□□□□ 0.68
Ttc3O88196 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.32■□□□□ 0.68
Ttc3O88196 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ttc3O88196 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.31■□□□□ 0.68
Ttc3O88196 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ttc3O88196 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms