Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stra6O70491 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stra6O70491 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Stra6O70491 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Stra6O70491 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.4■□□□□ 0.86
Stra6O70491 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Stra6O70491 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Stra6O70491 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Stra6O70491 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.39■□□□□ 0.86
Stra6O70491 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Stra6O70491 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Stra6O70491 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.39■□□□□ 0.85
Stra6O70491 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Stra6O70491 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Stra6O70491 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Stra6O70491 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.38■□□□□ 0.85
Stra6O70491 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Stra6O70491 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Stra6O70491 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Stra6O70491 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Stra6O70491 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.38■□□□□ 0.85
Stra6O70491 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Stra6O70491 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Stra6O70491 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Stra6O70491 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Stra6O70491 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Stra6O70491 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Stra6O70491 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Stra6O70491 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Stra6O70491 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Stra6O70491 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Stra6O70491 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Stra6O70491 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Stra6O70491 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Stra6O70491 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Stra6O70491 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.36■□□□□ 0.85
Stra6O70491 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Stra6O70491 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.36■□□□□ 0.85
Stra6O70491 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Stra6O70491 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Stra6O70491 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Stra6O70491 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.36■□□□□ 0.85
Stra6O70491 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Stra6O70491 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.35■□□□□ 0.85
Stra6O70491 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Stra6O70491 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.34■□□□□ 0.85
Stra6O70491 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Stra6O70491 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Stra6O70491 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.34■□□□□ 0.85
Stra6O70491 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Stra6O70491 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Stra6O70491 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Stra6O70491 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.34■□□□□ 0.85
Stra6O70491 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Stra6O70491 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Stra6O70491 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.34■□□□□ 0.85
Stra6O70491 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Stra6O70491 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Stra6O70491 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Stra6O70491 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Stra6O70491 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Stra6O70491 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Stra6O70491 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.33■□□□□ 0.85
Stra6O70491 Gm15565-201ENSMUST00000118890 427 ntBASIC20.33■□□□□ 0.85
Stra6O70491 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.33■□□□□ 0.85
Stra6O70491 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.33■□□□□ 0.85
Stra6O70491 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Stra6O70491 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Stra6O70491 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Stra6O70491 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Stra6O70491 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Stra6O70491 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Stra6O70491 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Stra6O70491 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Stra6O70491 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stra6O70491 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stra6O70491 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Stra6O70491 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.32■□□□□ 0.84
Stra6O70491 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.32■□□□□ 0.84
Stra6O70491 Gm37055-201ENSMUST00000191866 133 ntBASIC20.32■□□□□ 0.84
Stra6O70491 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Stra6O70491 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.32■□□□□ 0.84
Stra6O70491 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stra6O70491 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Stra6O70491 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Stra6O70491 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Stra6O70491 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Stra6O70491 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Stra6O70491 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms