Protein–RNA interactions for Protein: O55106

Strn, Striatin, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrnO55106 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
StrnO55106 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
StrnO55106 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
StrnO55106 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.26■□□□□ 0.83
StrnO55106 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.26■□□□□ 0.83
StrnO55106 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrnO55106 Mir5122-201ENSMUST00000175004 89 ntBASIC20.26■□□□□ 0.83
StrnO55106 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
StrnO55106 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrnO55106 Zfp783-201ENSMUST00000095946 670 ntBASIC20.26■□□□□ 0.83
StrnO55106 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
StrnO55106 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
StrnO55106 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.26■□□□□ 0.83
StrnO55106 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
StrnO55106 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.25■□□□□ 0.83
StrnO55106 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
StrnO55106 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
StrnO55106 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
StrnO55106 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
StrnO55106 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
StrnO55106 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
StrnO55106 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
StrnO55106 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrnO55106 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrnO55106 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrnO55106 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
StrnO55106 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrnO55106 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
StrnO55106 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.24■□□□□ 0.83
StrnO55106 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
StrnO55106 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrnO55106 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
StrnO55106 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrnO55106 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
StrnO55106 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
StrnO55106 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
StrnO55106 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
StrnO55106 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.23■□□□□ 0.83
StrnO55106 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.23■□□□□ 0.83
StrnO55106 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
StrnO55106 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
StrnO55106 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
StrnO55106 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.23■□□□□ 0.83
StrnO55106 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
StrnO55106 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
StrnO55106 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
StrnO55106 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
StrnO55106 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
StrnO55106 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
StrnO55106 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
StrnO55106 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.22■□□□□ 0.83
StrnO55106 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.22■□□□□ 0.83
StrnO55106 Gm10138-203ENSMUST00000206952 366 ntBASIC20.22■□□□□ 0.83
StrnO55106 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.22■□□□□ 0.83
StrnO55106 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
StrnO55106 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
StrnO55106 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
StrnO55106 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
StrnO55106 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
StrnO55106 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
StrnO55106 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
StrnO55106 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.21■□□□□ 0.83
StrnO55106 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
StrnO55106 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
StrnO55106 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.21■□□□□ 0.83
StrnO55106 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
StrnO55106 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrnO55106 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
StrnO55106 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrnO55106 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrnO55106 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrnO55106 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.2■□□□□ 0.82
StrnO55106 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrnO55106 Mtag2-201ENSMUST00000058665 714 ntBASIC20.2■□□□□ 0.82
StrnO55106 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
StrnO55106 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
StrnO55106 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
StrnO55106 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrnO55106 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
StrnO55106 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrnO55106 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrnO55106 Gm9987-201ENSMUST00000069768 567 ntBASIC20.19■□□□□ 0.82
StrnO55106 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrnO55106 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrnO55106 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
StrnO55106 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.18■□□□□ 0.82
StrnO55106 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.18■□□□□ 0.82
StrnO55106 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.18■□□□□ 0.82
StrnO55106 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
StrnO55106 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms