Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Per2O54943 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.18■□□□□ 0.66
Per2O54943 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Per2O54943 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.18■□□□□ 0.66
Per2O54943 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per2O54943 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.18■□□□□ 0.66
Per2O54943 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Per2O54943 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per2O54943 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.18■□□□□ 0.66
Per2O54943 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per2O54943 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Per2O54943 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per2O54943 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per2O54943 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Per2O54943 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per2O54943 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per2O54943 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per2O54943 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per2O54943 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.17■□□□□ 0.66
Per2O54943 Gm18671-201ENSMUST00000214826 683 ntBASIC19.17■□□□□ 0.66
Per2O54943 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per2O54943 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Per2O54943 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Per2O54943 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Per2O54943 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Per2O54943 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per2O54943 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per2O54943 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per2O54943 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Per2O54943 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Per2O54943 Gm5874-201ENSMUST00000096101 508 ntBASIC19.16■□□□□ 0.66
Per2O54943 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per2O54943 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per2O54943 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per2O54943 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.16■□□□□ 0.66
Per2O54943 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Per2O54943 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per2O54943 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Per2O54943 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.15■□□□□ 0.66
Per2O54943 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.15■□□□□ 0.66
Per2O54943 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Per2O54943 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.66
Per2O54943 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Per2O54943 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Per2O54943 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Per2O54943 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per2O54943 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per2O54943 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per2O54943 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.14■□□□□ 0.65
Per2O54943 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.14■□□□□ 0.65
Per2O54943 Gm10033-202ENSMUST00000211874 928 ntBASIC19.14■□□□□ 0.65
Per2O54943 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.14■□□□□ 0.65
Per2O54943 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Per2O54943 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Per2O54943 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per2O54943 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per2O54943 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Per2O54943 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per2O54943 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per2O54943 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Per2O54943 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.13■□□□□ 0.65
Per2O54943 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Per2O54943 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.13■□□□□ 0.65
Per2O54943 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Gm42642-201ENSMUST00000200683 355 ntBASIC19.13■□□□□ 0.65
Per2O54943 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Per2O54943 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.13■□□□□ 0.65
Per2O54943 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.13■□□□□ 0.65
Per2O54943 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Per2O54943 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Per2O54943 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Per2O54943 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Per2O54943 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Per2O54943 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.12■□□□□ 0.65
Per2O54943 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Per2O54943 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms