Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DffaO54786 Nespas-201ENSMUST00000143738 1083 ntBASIC19.27■□□□□ 0.68
DffaO54786 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.27■□□□□ 0.68
DffaO54786 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
DffaO54786 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
DffaO54786 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DffaO54786 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.27■□□□□ 0.67
DffaO54786 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DffaO54786 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
DffaO54786 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
DffaO54786 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.26■□□□□ 0.67
DffaO54786 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.26■□□□□ 0.67
DffaO54786 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Gm6420-201ENSMUST00000193885 723 ntBASIC19.26■□□□□ 0.67
DffaO54786 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
DffaO54786 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DffaO54786 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DffaO54786 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DffaO54786 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DffaO54786 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DffaO54786 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DffaO54786 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DffaO54786 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DffaO54786 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DffaO54786 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DffaO54786 Gm18284-201ENSMUST00000172604 624 ntBASIC19.25■□□□□ 0.67
DffaO54786 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.25■□□□□ 0.67
DffaO54786 Gm7514-201ENSMUST00000209475 934 ntBASIC19.25■□□□□ 0.67
DffaO54786 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DffaO54786 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DffaO54786 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DffaO54786 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
DffaO54786 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
DffaO54786 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.24■□□□□ 0.67
DffaO54786 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
DffaO54786 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DffaO54786 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.24■□□□□ 0.67
DffaO54786 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DffaO54786 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DffaO54786 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DffaO54786 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.24■□□□□ 0.67
DffaO54786 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DffaO54786 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
DffaO54786 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
DffaO54786 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DffaO54786 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffaO54786 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DffaO54786 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.22■□□□□ 0.67
DffaO54786 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffaO54786 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.22■□□□□ 0.67
DffaO54786 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.22■□□□□ 0.67
DffaO54786 AV356131-201ENSMUST00000206201 750 ntBASIC19.22■□□□□ 0.67
DffaO54786 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.22■□□□□ 0.67
DffaO54786 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DffaO54786 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DffaO54786 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Gm26571-201ENSMUST00000181399 666 ntBASIC19.21■□□□□ 0.67
DffaO54786 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DffaO54786 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DffaO54786 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DffaO54786 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DffaO54786 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DffaO54786 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DffaO54786 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DffaO54786 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DffaO54786 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DffaO54786 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.19■□□□□ 0.66
DffaO54786 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DffaO54786 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DffaO54786 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.19■□□□□ 0.66
DffaO54786 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.19■□□□□ 0.66
DffaO54786 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DffaO54786 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DffaO54786 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms