Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk3O35492 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Clk3O35492 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk3O35492 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk3O35492 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clk3O35492 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.5■□□□□ 0.39
Clk3O35492 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clk3O35492 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk3O35492 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clk3O35492 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clk3O35492 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clk3O35492 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.49■□□□□ 0.39
Clk3O35492 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.49■□□□□ 0.39
Clk3O35492 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk3O35492 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk3O35492 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk3O35492 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clk3O35492 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk3O35492 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk3O35492 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clk3O35492 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clk3O35492 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk3O35492 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.48■□□□□ 0.39
Clk3O35492 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clk3O35492 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.48■□□□□ 0.39
Clk3O35492 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk3O35492 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.48■□□□□ 0.39
Clk3O35492 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.48■□□□□ 0.39
Clk3O35492 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk3O35492 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clk3O35492 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Clk3O35492 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Clk3O35492 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Clk3O35492 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
Clk3O35492 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Clk3O35492 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Clk3O35492 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk3O35492 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk3O35492 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clk3O35492 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.46■□□□□ 0.39
Clk3O35492 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk3O35492 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clk3O35492 Gm42778-201ENSMUST00000199644 553 ntBASIC17.46■□□□□ 0.39
Clk3O35492 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Clk3O35492 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk3O35492 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk3O35492 Gm10493-201ENSMUST00000097270 612 ntBASIC17.46■□□□□ 0.39
Clk3O35492 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Clk3O35492 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Clk3O35492 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk3O35492 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk3O35492 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Clk3O35492 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk3O35492 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clk3O35492 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Clk3O35492 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk3O35492 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.45■□□□□ 0.38
Clk3O35492 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.45■□□□□ 0.38
Clk3O35492 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.45■□□□□ 0.38
Clk3O35492 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.45■□□□□ 0.38
Clk3O35492 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk3O35492 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk3O35492 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.45■□□□□ 0.38
Clk3O35492 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk3O35492 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk3O35492 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk3O35492 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk3O35492 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.44■□□□□ 0.38
Clk3O35492 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Clk3O35492 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clk3O35492 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.44■□□□□ 0.38
Clk3O35492 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Clk3O35492 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Clk3O35492 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk3O35492 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clk3O35492 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Clk3O35492 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.43■□□□□ 0.38
Clk3O35492 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.43■□□□□ 0.38
Clk3O35492 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk3O35492 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.43■□□□□ 0.38
Clk3O35492 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms