Protein–RNA interactions for Protein: O08842

Gfra2, GDNF family receptor alpha-2, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra2O08842 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gfra2O08842 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gfra2O08842 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Gfra2O08842 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.84■□□□□ 0.61
Gfra2O08842 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gfra2O08842 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.84■□□□□ 0.61
Gfra2O08842 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gfra2O08842 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gfra2O08842 Gm10698-201ENSMUST00000182663 604 ntBASIC18.84■□□□□ 0.61
Gfra2O08842 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Gfra2O08842 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Gfra2O08842 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gfra2O08842 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gfra2O08842 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gfra2O08842 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.83■□□□□ 0.61
Gfra2O08842 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gfra2O08842 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Gfra2O08842 Gm18666-201ENSMUST00000190039 958 ntBASIC18.83■□□□□ 0.6
Gfra2O08842 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.83■□□□□ 0.6
Gfra2O08842 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.83■□□□□ 0.6
Gfra2O08842 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gfra2O08842 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gfra2O08842 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gfra2O08842 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gfra2O08842 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gfra2O08842 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfra2O08842 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfra2O08842 Gm13158-201ENSMUST00000122007 736 ntBASIC18.82■□□□□ 0.6
Gfra2O08842 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfra2O08842 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.82■□□□□ 0.6
Gfra2O08842 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.82■□□□□ 0.6
Gfra2O08842 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfra2O08842 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfra2O08842 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfra2O08842 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gfra2O08842 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gfra2O08842 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gfra2O08842 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gfra2O08842 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.81■□□□□ 0.6
Gfra2O08842 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gfra2O08842 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.81■□□□□ 0.6
Gfra2O08842 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.81■□□□□ 0.6
Gfra2O08842 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gfra2O08842 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gfra2O08842 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.81■□□□□ 0.6
Gfra2O08842 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gfra2O08842 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gfra2O08842 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.81■□□□□ 0.6
Gfra2O08842 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gfra2O08842 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfra2O08842 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfra2O08842 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfra2O08842 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfra2O08842 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Gfra2O08842 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.8■□□□□ 0.6
Gfra2O08842 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gfra2O08842 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.8■□□□□ 0.6
Gfra2O08842 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfra2O08842 Mtag2-201ENSMUST00000058665 714 ntBASIC18.8■□□□□ 0.6
Gfra2O08842 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gfra2O08842 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfra2O08842 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfra2O08842 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gfra2O08842 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.79■□□□□ 0.6
Gfra2O08842 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gfra2O08842 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gfra2O08842 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gfra2O08842 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gfra2O08842 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.79■□□□□ 0.6
Gfra2O08842 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gfra2O08842 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra2O08842 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra2O08842 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra2O08842 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra2O08842 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra2O08842 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.78■□□□□ 0.6
Gfra2O08842 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra2O08842 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra2O08842 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra2O08842 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra2O08842 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra2O08842 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gfra2O08842 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.77■□□□□ 0.6
Gfra2O08842 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.77■□□□□ 0.6
Gfra2O08842 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra2O08842 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra2O08842 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.77■□□□□ 0.6
Gfra2O08842 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.77■□□□□ 0.6
Gfra2O08842 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra2O08842 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms