Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ClockO08785 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ClockO08785 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClockO08785 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClockO08785 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.46■□□□□ 0.39
ClockO08785 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClockO08785 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClockO08785 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClockO08785 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ClockO08785 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ClockO08785 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ClockO08785 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ClockO08785 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClockO08785 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ClockO08785 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ClockO08785 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ClockO08785 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClockO08785 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.45■□□□□ 0.38
ClockO08785 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ClockO08785 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ClockO08785 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ClockO08785 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.45■□□□□ 0.38
ClockO08785 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.45■□□□□ 0.38
ClockO08785 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.45■□□□□ 0.38
ClockO08785 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClockO08785 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClockO08785 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ClockO08785 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.44■□□□□ 0.38
ClockO08785 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.44■□□□□ 0.38
ClockO08785 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.44■□□□□ 0.38
ClockO08785 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
ClockO08785 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ClockO08785 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClockO08785 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClockO08785 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClockO08785 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClockO08785 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ClockO08785 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ClockO08785 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ClockO08785 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClockO08785 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.43■□□□□ 0.38
ClockO08785 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClockO08785 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClockO08785 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ClockO08785 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.43■□□□□ 0.38
ClockO08785 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClockO08785 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ClockO08785 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ClockO08785 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.42■□□□□ 0.38
ClockO08785 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.42■□□□□ 0.38
ClockO08785 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.42■□□□□ 0.38
ClockO08785 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ClockO08785 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClockO08785 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.42■□□□□ 0.38
ClockO08785 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClockO08785 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClockO08785 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ClockO08785 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClockO08785 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.41■□□□□ 0.38
ClockO08785 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ClockO08785 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClockO08785 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClockO08785 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClockO08785 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClockO08785 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ClockO08785 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ClockO08785 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClockO08785 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClockO08785 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClockO08785 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClockO08785 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClockO08785 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.4■□□□□ 0.38
ClockO08785 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.4■□□□□ 0.38
ClockO08785 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.4■□□□□ 0.38
ClockO08785 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClockO08785 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClockO08785 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClockO08785 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ClockO08785 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 317.3 ms