Protein–RNA interactions for Protein: O08750

Nfil3, Nuclear factor interleukin-3-regulated protein, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfil3O08750 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nfil3O08750 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nfil3O08750 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nfil3O08750 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nfil3O08750 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.13■□□□□ 0.97
Nfil3O08750 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nfil3O08750 Gm20049-201ENSMUST00000219950 730 ntBASIC21.13■□□□□ 0.97
Nfil3O08750 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nfil3O08750 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nfil3O08750 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nfil3O08750 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nfil3O08750 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nfil3O08750 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Nfil3O08750 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.12■□□□□ 0.97
Nfil3O08750 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.12■□□□□ 0.97
Nfil3O08750 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.12■□□□□ 0.97
Nfil3O08750 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nfil3O08750 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nfil3O08750 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nfil3O08750 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nfil3O08750 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Nfil3O08750 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nfil3O08750 Gm44549-201ENSMUST00000208351 577 ntBASIC21.11■□□□□ 0.97
Nfil3O08750 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nfil3O08750 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nfil3O08750 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nfil3O08750 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Nfil3O08750 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nfil3O08750 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nfil3O08750 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nfil3O08750 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nfil3O08750 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nfil3O08750 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nfil3O08750 Gm10653-202ENSMUST00000139570 835 ntBASIC21.1■□□□□ 0.97
Nfil3O08750 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nfil3O08750 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nfil3O08750 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nfil3O08750 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.1■□□□□ 0.97
Nfil3O08750 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nfil3O08750 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.1■□□□□ 0.97
Nfil3O08750 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nfil3O08750 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.09■□□□□ 0.97
Nfil3O08750 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nfil3O08750 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nfil3O08750 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Nfil3O08750 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nfil3O08750 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.09■□□□□ 0.97
Nfil3O08750 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Nfil3O08750 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.09■□□□□ 0.97
Nfil3O08750 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Nfil3O08750 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Nfil3O08750 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.09■□□□□ 0.97
Nfil3O08750 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nfil3O08750 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.09■□□□□ 0.97
Nfil3O08750 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nfil3O08750 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nfil3O08750 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nfil3O08750 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nfil3O08750 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nfil3O08750 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.08■□□□□ 0.97
Nfil3O08750 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nfil3O08750 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.08■□□□□ 0.97
Nfil3O08750 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.08■□□□□ 0.97
Nfil3O08750 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.08■□□□□ 0.97
Nfil3O08750 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nfil3O08750 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nfil3O08750 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Nfil3O08750 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.08■□□□□ 0.97
Nfil3O08750 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nfil3O08750 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nfil3O08750 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Nfil3O08750 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.07■□□□□ 0.96
Nfil3O08750 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.07■□□□□ 0.96
Nfil3O08750 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nfil3O08750 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nfil3O08750 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nfil3O08750 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms