Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Golph3-205ENSMUST00000228671 2842 ntBASIC14.18□□□□□ -0.14
MsmbO08540 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.18□□□□□ -0.14
MsmbO08540 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MsmbO08540 Gm5408-201ENSMUST00000197998 747 ntBASIC14.18□□□□□ -0.14
MsmbO08540 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.18□□□□□ -0.14
MsmbO08540 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MsmbO08540 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.18□□□□□ -0.14
MsmbO08540 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MsmbO08540 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MsmbO08540 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.18□□□□□ -0.14
MsmbO08540 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MsmbO08540 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
MsmbO08540 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MsmbO08540 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MsmbO08540 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MsmbO08540 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MsmbO08540 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.17□□□□□ -0.14
MsmbO08540 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MsmbO08540 Gm7290-201ENSMUST00000104990 617 ntBASIC14.17□□□□□ -0.14
MsmbO08540 Gm12918-201ENSMUST00000120234 636 ntBASIC14.17□□□□□ -0.14
MsmbO08540 Gm15710-201ENSMUST00000121821 636 ntBASIC14.17□□□□□ -0.14
MsmbO08540 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Gm5075-201ENSMUST00000196916 622 ntBASIC14.17□□□□□ -0.14
MsmbO08540 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
MsmbO08540 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.17□□□□□ -0.14
MsmbO08540 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.17□□□□□ -0.14
MsmbO08540 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
MsmbO08540 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MsmbO08540 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MsmbO08540 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
MsmbO08540 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.16□□□□□ -0.14
MsmbO08540 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
MsmbO08540 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
MsmbO08540 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.16□□□□□ -0.14
MsmbO08540 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
MsmbO08540 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.15□□□□□ -0.14
MsmbO08540 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.15□□□□□ -0.14
MsmbO08540 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
MsmbO08540 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
MsmbO08540 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
MsmbO08540 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.15□□□□□ -0.14
MsmbO08540 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.15□□□□□ -0.14
MsmbO08540 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
MsmbO08540 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
MsmbO08540 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
MsmbO08540 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
MsmbO08540 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
MsmbO08540 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
MsmbO08540 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.14□□□□□ -0.15
MsmbO08540 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
MsmbO08540 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.14□□□□□ -0.15
MsmbO08540 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.14□□□□□ -0.15
MsmbO08540 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
MsmbO08540 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
MsmbO08540 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms