Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh1F7BJK1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdh1F7BJK1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdh1F7BJK1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Pcdh1F7BJK1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh1F7BJK1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdh1F7BJK1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
Pcdh1F7BJK1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdh1F7BJK1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdh1F7BJK1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdh1F7BJK1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdh1F7BJK1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms