Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.87■□□□□ 0.61
Atf6F6VAN0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Atf6F6VAN0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.87■□□□□ 0.61
Atf6F6VAN0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atf6F6VAN0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.86■□□□□ 0.61
Atf6F6VAN0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 AV356131-201ENSMUST00000206201 750 ntBASIC18.86■□□□□ 0.61
Atf6F6VAN0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf6F6VAN0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.85■□□□□ 0.61
Atf6F6VAN0 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.85■□□□□ 0.61
Atf6F6VAN0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atf6F6VAN0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Gm26571-201ENSMUST00000181399 666 ntBASIC18.84■□□□□ 0.61
Atf6F6VAN0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf6F6VAN0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Atf6F6VAN0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Atf6F6VAN0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf6F6VAN0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Atf6F6VAN0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf6F6VAN0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf6F6VAN0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Atf6F6VAN0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf6F6VAN0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf6F6VAN0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf6F6VAN0 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.82■□□□□ 0.6
Atf6F6VAN0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.82■□□□□ 0.6
Atf6F6VAN0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf6F6VAN0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms