Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rnf213E9Q555 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Rnf213E9Q555 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rnf213E9Q555 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rnf213E9Q555 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Rnf213E9Q555 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC9□□□□□ -0.97
Rnf213E9Q555 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rnf213E9Q555 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9□□□□□ -0.97
Rnf213E9Q555 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rnf213E9Q555 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Gm37935-201ENSMUST00000192012 982 ntBASIC8.99□□□□□ -0.97
Rnf213E9Q555 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Gm6623-201ENSMUST00000173570 544 ntBASIC8.99□□□□□ -0.97
Rnf213E9Q555 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Gm20634-201ENSMUST00000090779 2956 ntBASIC8.99□□□□□ -0.97
Rnf213E9Q555 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Zfp783-201ENSMUST00000095946 670 ntBASIC8.99□□□□□ -0.97
Rnf213E9Q555 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC8.99□□□□□ -0.97
Rnf213E9Q555 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Gm3272-201ENSMUST00000181181 1229 ntBASIC8.98□□□□□ -0.97
Rnf213E9Q555 Gm10566-201ENSMUST00000086739 996 ntBASIC8.98□□□□□ -0.97
Rnf213E9Q555 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Gm11950-201ENSMUST00000121615 838 ntBASIC8.98□□□□□ -0.97
Rnf213E9Q555 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Gm38027-201ENSMUST00000192315 235 ntBASIC8.98□□□□□ -0.97
Rnf213E9Q555 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rnf213E9Q555 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Gm27525-201ENSMUST00000184465 107 ntBASIC8.98□□□□□ -0.97
Rnf213E9Q555 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rnf213E9Q555 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Rnf213E9Q555 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC8.96□□□□□ -0.97
Rnf213E9Q555 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Gm27459-201ENSMUST00000184860 107 ntBASIC8.96□□□□□ -0.97
Rnf213E9Q555 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rnf213E9Q555 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rnf213E9Q555 Gm18206-201ENSMUST00000207027 926 ntBASIC8.96□□□□□ -0.98
Rnf213E9Q555 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rnf213E9Q555 AC132104.2-201ENSMUST00000215011 266 ntBASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms