Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.61■□□□□ 0.57
Col6a3E9PWQ3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col6a3E9PWQ3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col6a3E9PWQ3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.61■□□□□ 0.57
Col6a3E9PWQ3 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.61■□□□□ 0.57
Col6a3E9PWQ3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a3E9PWQ3 Gm14057-201ENSMUST00000120631 482 ntBASIC18.6■□□□□ 0.57
Col6a3E9PWQ3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a3E9PWQ3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.6■□□□□ 0.57
Col6a3E9PWQ3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a3E9PWQ3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a3E9PWQ3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col6a3E9PWQ3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Col6a3E9PWQ3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Gm2274-201ENSMUST00000184539 609 ntBASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.59■□□□□ 0.57
Col6a3E9PWQ3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col6a3E9PWQ3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col6a3E9PWQ3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Col6a3E9PWQ3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.58■□□□□ 0.56
Col6a3E9PWQ3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.58■□□□□ 0.56
Col6a3E9PWQ3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 Gm27702-201ENSMUST00000184512 56 ntBASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Col6a3E9PWQ3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col6a3E9PWQ3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.55■□□□□ 0.56
Col6a3E9PWQ3 Gm10576-201ENSMUST00000191927 825 ntBASIC18.55■□□□□ 0.56
Col6a3E9PWQ3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.55■□□□□ 0.56
Col6a3E9PWQ3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.55■□□□□ 0.56
Col6a3E9PWQ3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col6a3E9PWQ3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col6a3E9PWQ3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.55■□□□□ 0.56
Col6a3E9PWQ3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.55■□□□□ 0.56
Col6a3E9PWQ3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Gm11950-201ENSMUST00000121615 838 ntBASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Gm12085-201ENSMUST00000119263 940 ntBASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col6a3E9PWQ3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col6a3E9PWQ3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Col6a3E9PWQ3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col6a3E9PWQ3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col6a3E9PWQ3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col6a3E9PWQ3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms