Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC21.05■□□□□ 0.96
Syce3B5KM66 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syce3B5KM66 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Syce3B5KM66 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syce3B5KM66 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.05■□□□□ 0.96
Syce3B5KM66 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
Syce3B5KM66 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.05■□□□□ 0.96
Syce3B5KM66 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.05■□□□□ 0.96
Syce3B5KM66 Gm9959-201ENSMUST00000068277 390 ntBASIC21.05■□□□□ 0.96
Syce3B5KM66 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syce3B5KM66 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syce3B5KM66 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syce3B5KM66 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syce3B5KM66 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Syce3B5KM66 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Syce3B5KM66 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syce3B5KM66 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syce3B5KM66 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syce3B5KM66 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syce3B5KM66 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Syce3B5KM66 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Syce3B5KM66 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Syce3B5KM66 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Syce3B5KM66 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Syce3B5KM66 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Syce3B5KM66 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Syce3B5KM66 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Syce3B5KM66 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Gm7860-201ENSMUST00000121190 879 ntBASIC21.03■□□□□ 0.96
Syce3B5KM66 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Syce3B5KM66 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.03■□□□□ 0.96
Syce3B5KM66 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Syce3B5KM66 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.03■□□□□ 0.96
Syce3B5KM66 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Syce3B5KM66 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Syce3B5KM66 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
Syce3B5KM66 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Syce3B5KM66 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.02■□□□□ 0.96
Syce3B5KM66 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Syce3B5KM66 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Syce3B5KM66 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Syce3B5KM66 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Syce3B5KM66 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Syce3B5KM66 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syce3B5KM66 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syce3B5KM66 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syce3B5KM66 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Syce3B5KM66 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syce3B5KM66 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Syce3B5KM66 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syce3B5KM66 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syce3B5KM66 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.01■□□□□ 0.95
Syce3B5KM66 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syce3B5KM66 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syce3B5KM66 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syce3B5KM66 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syce3B5KM66 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syce3B5KM66 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syce3B5KM66 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syce3B5KM66 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Syce3B5KM66 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21■□□□□ 0.95
Syce3B5KM66 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21■□□□□ 0.95
Syce3B5KM66 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Syce3B5KM66 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Syce3B5KM66 Gm43294-201ENSMUST00000202850 2490 ntBASIC21■□□□□ 0.95
Syce3B5KM66 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syce3B5KM66 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Syce3B5KM66 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syce3B5KM66 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.99■□□□□ 0.95
Syce3B5KM66 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.99■□□□□ 0.95
Syce3B5KM66 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Syce3B5KM66 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.99■□□□□ 0.95
Syce3B5KM66 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syce3B5KM66 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syce3B5KM66 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.98■□□□□ 0.95
Syce3B5KM66 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syce3B5KM66 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.98■□□□□ 0.95
Syce3B5KM66 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms