Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm11127A7VMS2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Spcs1-204ENSMUST00000226782 949 ntBASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm11127A7VMS2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm11127A7VMS2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm11127A7VMS2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm11127A7VMS2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm11127A7VMS2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms