Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.82□□□□□ -0.04
Trav12d-1A0N8R0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav12d-1A0N8R0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12d-1A0N8R0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12d-1A0N8R0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav12d-1A0N8R0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-1A0N8R0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-1A0N8R0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav12d-1A0N8R0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-1A0N8R0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav12d-1A0N8R0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-1A0N8R0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-1A0N8R0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12d-1A0N8R0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Trav12d-1A0N8R0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12d-1A0N8R0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12d-1A0N8R0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12d-1A0N8R0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.77□□□□□ -0.05
Trav12d-1A0N8R0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12d-1A0N8R0 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.77□□□□□ -0.05
Trav12d-1A0N8R0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12d-1A0N8R0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12d-1A0N8R0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-1A0N8R0 Mir7075-201ENSMUST00000184187 82 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms