Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lnp1A0A1B0GSK3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Lnp1A0A1B0GSK3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Lnp1A0A1B0GSK3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Lnp1A0A1B0GSK3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Lnp1A0A1B0GSK3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lnp1A0A1B0GSK3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Nespas-201ENSMUST00000143738 1083 ntBASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm6420-201ENSMUST00000193885 723 ntBASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm15039-201ENSMUST00000118914 875 ntBASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 AV356131-201ENSMUST00000206201 750 ntBASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm7514-201ENSMUST00000209475 934 ntBASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lnp1A0A1B0GSK3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lnp1A0A1B0GSK3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lnp1A0A1B0GSK3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lnp1A0A1B0GSK3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms