Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 Gm42642-201ENSMUST00000200683 355 ntBASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Pcna-ps2A0A140T8V5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Gm18671-201ENSMUST00000214826 683 ntBASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcna-ps2A0A140T8V5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcna-ps2A0A140T8V5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Pcna-ps2A0A140T8V5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcna-ps2A0A140T8V5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcna-ps2A0A140T8V5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcna-ps2A0A140T8V5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcna-ps2A0A140T8V5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcna-ps2A0A140T8V5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcna-ps2A0A140T8V5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.45■□□□□ 0.54
Pcna-ps2A0A140T8V5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcna-ps2A0A140T8V5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcna-ps2A0A140T8V5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcna-ps2A0A140T8V5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcna-ps2A0A140T8V5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Gm8495-201ENSMUST00000188740 694 ntBASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcna-ps2A0A140T8V5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms