Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-2A0A140T8N6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Nespas-201ENSMUST00000143738 1083 ntBASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm26571-201ENSMUST00000181399 666 ntBASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm6420-201ENSMUST00000193885 723 ntBASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm42569-201ENSMUST00000200539 472 ntBASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-2A0A140T8N6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv13-2A0A140T8N6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-2A0A140T8N6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-2A0A140T8N6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-2A0A140T8N6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-2A0A140T8N6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-2A0A140T8N6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-2A0A140T8N6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-2A0A140T8N6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv13-2A0A140T8N6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 249.8 ms