Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Gm21956-201ENSMUST00000179946 522 ntBASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv29A0A0G2LB96 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv29A0A0G2LB96 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv29A0A0G2LB96 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv29A0A0G2LB96 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trbv29A0A0G2LB96 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv29A0A0G2LB96 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv29A0A0G2LB96 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trbv29A0A0G2LB96 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv29A0A0G2LB96 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.27■□□□□ 0.03
Trbv29A0A0G2LB96 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv29A0A0G2LB96 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.27■□□□□ 0.03
Trbv29A0A0G2LB96 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv29A0A0G2LB96 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv29A0A0G2LB96 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv29A0A0G2LB96 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv29A0A0G2LB96 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.25■□□□□ 0.03
Trbv29A0A0G2LB96 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv29A0A0G2LB96 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv29A0A0G2LB96 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv29A0A0G2LB96 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trbv29A0A0G2LB96 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv29A0A0G2LB96 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv29A0A0G2LB96 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms