Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv20A0A0B4J1H5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv20A0A0B4J1H5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv20A0A0B4J1H5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv20A0A0B4J1H5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trbv20A0A0B4J1H5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv20A0A0B4J1H5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv20A0A0B4J1H5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv20A0A0B4J1H5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv20A0A0B4J1H5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm8969-201ENSMUST00000199694 526 ntBASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv20A0A0B4J1H5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trbv20A0A0B4J1H5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms