Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv1A0A0B4J1G7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv1A0A0B4J1G7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 AA386476-201ENSMUST00000098781 1665 ntBASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv1A0A0B4J1G7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Spcs1-204ENSMUST00000226782 949 ntBASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv1A0A0B4J1G7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms