Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Gm27454-201ENSMUST00000185090 204 ntBASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
BC053393A0A0B4J1F6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Gm12821-201ENSMUST00000120022 600 ntBASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
BC053393A0A0B4J1F6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BC053393A0A0B4J1F6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Gm8493-201ENSMUST00000196881 489 ntBASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Gm45417-201ENSMUST00000209533 758 ntBASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Fst-202ENSMUST00000223640 2612 ntBASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BC053393A0A0B4J1F6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BC053393A0A0B4J1F6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BC053393A0A0B4J1F6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms