Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav9d-3A0A075B695 Reep4-203ENSMUST00000226563 1444 ntBASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav9d-3A0A075B695 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9d-3A0A075B695 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9d-3A0A075B695 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9d-3A0A075B695 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9d-3A0A075B695 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms