Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav18A0A075B656 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav18A0A075B656 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav18A0A075B656 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav18A0A075B656 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav18A0A075B656 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav18A0A075B656 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav18A0A075B656 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav18A0A075B656 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trav18A0A075B656 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav18A0A075B656 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav18A0A075B656 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.08■□□□□ 0
Trav18A0A075B656 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav18A0A075B656 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav18A0A075B656 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav18A0A075B656 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav18A0A075B656 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav18A0A075B656 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav18A0A075B656 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.08■□□□□ 0
Trav18A0A075B656 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav18A0A075B656 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav18A0A075B656 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.08■□□□□ 0
Trav18A0A075B656 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav18A0A075B656 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.07■□□□□ 0
Trav18A0A075B656 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.07■□□□□ 0
Trav18A0A075B656 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.07■□□□□ 0
Trav18A0A075B656 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.07■□□□□ 0
Trav18A0A075B656 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.07■□□□□ 0
Trav18A0A075B656 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav18A0A075B656 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.07■□□□□ 0
Trav18A0A075B656 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav18A0A075B656 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.06■□□□□ 0
Trav18A0A075B656 Gm43060-201ENSMUST00000200621 289 ntBASIC15.06■□□□□ 0
Trav18A0A075B656 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav18A0A075B656 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.06■□□□□ 0
Trav18A0A075B656 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav18A0A075B656 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.06■□□□□ 0
Trav18A0A075B656 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav18A0A075B656 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav18A0A075B656 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav18A0A075B656 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav18A0A075B656 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav18A0A075B656 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav18A0A075B656 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.05■□□□□ 0
Trav18A0A075B656 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.05■□□□□ 0
Trav18A0A075B656 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav18A0A075B656 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav18A0A075B656 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav18A0A075B656 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav18A0A075B656 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav18A0A075B656 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav18A0A075B656 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav18A0A075B656 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.05■□□□□ -0
Trav18A0A075B656 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.05■□□□□ -0
Trav18A0A075B656 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trav18A0A075B656 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav18A0A075B656 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav18A0A075B656 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav18A0A075B656 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav18A0A075B656 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav18A0A075B656 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav18A0A075B656 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav18A0A075B656 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav18A0A075B656 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav18A0A075B656 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav18A0A075B656 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav18A0A075B656 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav18A0A075B656 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.04■□□□□ -0
Trav18A0A075B656 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav18A0A075B656 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav18A0A075B656 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms